The importance of enhancer methylation for epigenetic regulation of tumorigenesis in squamous lung cancer

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' The importance of enhancer methylation for epigenetic regulation of tumorigenesis in squamous lung cancer' 의 참고문헌

  • Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences
    Moran, S. [2016]
  • Trimmomatic: a flexible trimmer for Illumina sequence data
  • Treatment of advanced squamous cell carcinoma of the lung : a review
  • Tobacco smoking-associated alterations in the immune microenvironment of squamous cell carcinomas
  • The role of enhancers in cancer
    Sur, I. [2016]
  • The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes
  • The NHGRI-EBI GWAS Catalog of published genome-wide association studies , targeted arrays and summary statistics 2019
  • The DNA methylation landscape of advanced prostate cancer
    Zhao, S. G. [2020]
  • The 2015 World Health Organization classification of lung tumors : impact of genetic, clinical and radiologic advances since the 2004 classification
  • Systematic identification of genes with a cancer-testis expression pattern in 19 cancer types
    Wang, C. [2016]
  • Surfactant protein D inhibits activation of non-small cell lung cancer-associated mutant EGFR and affects clinical outcomes of patients
    Umeda, Y. [2017]
  • Surfactant protein B suppresses lung cancer progression by inhibiting secretory phospholipase A2 activity and arachidonic acid production
    Lee, S. [2017]
  • Surfactant protein A suppresses lung cancer progression by regulating the polarization of tumor-associated macrophages
  • Super-enhancers in the control of cell identity and disease
  • STAR : ultrafast universal RNA-seq aligner .
  • Reactome knowledgebase of human biological pathways and processes
  • Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array with minfi
  • Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
    Love, M. I. [2014]
  • Many obesity-associated SNPs strongly associate with DNA methylation changes at proximal promoters and enhancers
    Voisin, S. [2015]
  • Korean Variant Archive(KOVA) : a reference database of genetic variations in the Korean population
    Lee, S. [2017]
  • Keratinization of Lung Squamous Cell Carcinoma Is Associated with Poor Clinical Outcome
    박혜정 [2017]
  • Increased expression of type VI collagen in lung fibrosis
    Specks, U. [1995]
  • Impact of oncogenic pathways on evasion of antitumour immune responses
  • Immune checkpoint inhibitors: recent progress and potential biomarkers
  • Genomics of response to immune checkpoint therapies for cancer: implications for precision medicine
  • Genome-wide mapping of genetic determinants influencing DNA methylation and gene expression in human hippocampus
    Schulz, H. [2017]
  • Genome-wide identification of differentially methylated promoters and enhancers associated with response to anti-PD-1 therapy in non-small cell lung cancer
    Cho Jae-Won [2020]
  • Genome-wide DNA methylation profiling reveals novel epigenetic signatures in squamous cell lung cancer
    Shi, Y. X. [2017]
  • GENCODE: the reference human genome annotation for The ENCODE Project
    Harrow, J. [2012]
  • G-protein-coupled receptors and cancer
  • FeatureCounts: an efficient general purpose program for assigning sequence reads to genomic features
    Liao, Y. [2014]
  • Expanded CIBERSORTx
    Rusk, N. [2019]
  • Epigenomic analysis detects aberrant superenhancer DNA methylation in human cancer
    Heyn , H. , [2016]
  • Epigenetic regulation in cancer progression
    Baxter, E. [2014]
  • Enhancer methylation dynamics contribute to cancer plasticity and patient mortality
    Bell, R. E. [2016]
  • Emerging contributions of cancer/testis antigens to neoplastic behaviors
  • DNA methylation of transcriptional enhancers and cancer predisposition
    Aran, D. [2013]
  • DNA methylation of distal regulatory sites characterizes dysregulation of cancer genes
    Aran, D. [2013]
  • DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load
    Jung, H. [2019]
  • DNA methylation loss in late-replicating domains is linked to mitotic cell division
    Zhou, W. [2018]
  • DNA hypomethylation in cancer cells
  • Comprehensive analysis of DNA methylation data with RnBeads
    Assenov, Y. [2014]
  • Comparison of aspects of smoking among the four histological types of lung cancer
  • Collagen I promotes epithelial-to-mesenchymal transition in lung cancer cells via transforming growth factor-beta signaling
  • Chromatin structure-based prediction of recurrent noncoding mutations in cancer
    Kim, K. [2016]
  • CancerSEA : a cancer single-cell state atlas .
    Yuan , H. , [2019]
  • CancerMine: a literature-mined resource for drivers, oncogenes and tumor suppressors in cancer
    Lever, J. [2019]