연구동향 분석

Transposable Elements and Genome Size Variations in Plants

Lee, Sung-Il Kim, Nam-Soo 2014년

논문상세정보
인용/피인용
' Transposable Elements and Genome Size Variations in Plants' 의 주제별 논문영향력
논문영향력 선정 방법
논문영향력 요약
주제
  • 생물진화
  • c-value
  • dnatransposableelements
  • genome-purging
  • genomesize
  • ltrretrotransposons
동일주제 총논문수 논문피인용 총횟수 주제별 논문영향력의 평균
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' Transposable Elements and Genome Size Variations in Plants' 의 참고문헌

  • Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution
    Chen J Nat Commun 4 : 1595 ~ [2013]
  • Variation in genomic form in plants and its ecological implications
    Bennett MD New Phytol 106 : 177 ~ 200 [1987]
  • Unexpected consequences of a sudden and massive transposon amplification on rice gene expression
    Naito K Nature 461 : 1130 ~ 1134 [2009]
  • Turning junk into gold: domestication of transposable elements and the creation of new genes in eukaryotes
    Volff JN Bioessays 28 : 913 ~ 922 [2006]
  • Transposable elements:powerful contributors to angiosperm evolution and diversity
    Oliver KR Genome Biol Evol 5 : 1886 ~ 1901 [2013]
  • Transposable elements, epigenetics, and genome evolution
    Fedoroff NV Science 338 : 758 ~ 767 [2012]
  • Transposable elements and the epigenetic regulation of the genome
    Slotkin RK Nat Rev Genet 8 : 272 ~ 285 [2007]
  • Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata
    Hollister JD Proc Natl Acad Sci U S A 108 : 2322 ~ 2327 [2011]
  • Transposable Elements: No More ‘Junk DNA’
    김윤지 Genomics & Informatics 10 (4) : 226 ~ 233 [2012]
  • Tourist : a large family of small inverted repeat elements frequently associated with maize genes
    Bureau TE Plant Cell 4 : 1283 ~ 1294 [1992]
  • The stability of broken ends of chromosomes in Zea mays
    McClintock B Genetics 26 : 234 ~ 282 [1941]
  • The polychromatic Helitron landscape of the maize genome
    Du C Proc Natl Acad Sci U S A 106 : 19916 ~ 19921 [2009]
  • The origin, evolution and proposed stabilization of the terms 'genome size' and 'C-value' to describe nuclear DNA contents
    Greilhuber J Ann Bot 95 : 255 ~ 260 [2005]
  • The mode and tempo of genome size evolution in eukaryotes
    Oliver MJ Genome Res 17 : 594 ~ 601 [2007]
  • The largest eukaryotic genome of them all?
    Pellicer J Bot J Linn Soc 164 : 10 ~ 15 [2010]
  • The large genome constraint hypothesis: evolution, ecology and phenotype
    Knight CA Ann Bot 95 : 177 ~ 190 [2005]
  • The genetic organization of chromosomes
    Thomas CA Jr Annu Rev Genet 5 : 237 ~ 256 [1971]
  • The fusion of broken ends of chromosomes following nuclear fusion
    McClintock B Proc Natl Acad Sci U S A 28 : 458 ~ 463 [1942]
  • The first 50 plant genomes
    Michael TP [2013]
  • The efficacy of Cot-based gene enrichment in wheat (Triticum aestivum L.)
    Lamoureux D Genome 48 : 1120 ~ 1126 [2005]
  • The diversity of LTR retrotransposons
    Havecker ER Genome Biol 5 : 225 ~ [2004]
  • The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis
    Corradi N Nat Commun 1 : 77 ~ [2010]
  • The association of mutants with homozygous deficiencies in Zea mays
    McClintock B Genetics 26 : 542 ~ 571 [1941]
  • The Pinus taeda genome is characterized by diverse and highly diverged repetitive sequences
    Kovach A BMC Genomics 11 : 420 ~ [2010]
  • The Norway spruce genome sequence and conifer genome evolution
    Nystedt B Nature 497 : 579 ~ 584 [2013]
  • The B73 maize genome: complexity, diversity, and dynamics
    Schnable PS Science 326 : 1112 ~ 1115 [2009]
  • The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
    Hu TT Nat Genet 43 : 476 ~ 481 [2011]
  • Stowaway : a new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants
    Bureau TE Plant Cell 6 : 907 ~ 916 [1994]
  • Selfish genes, the phenotype paradigm and genome evolution
    Doolittle WF Nature 284 : 601 ~ 603 [1980]
  • Selfish DNA: the ultimate parasite
    Orgel LE Nature 284 : 604 ~ 607 [1980]
  • Role of CG and non-CG methylation in immobilization of transposons in Arabidopsis
    Kato M Curr Biol 13 : 421 ~ 426 [2003]
  • Retrotranspositions in orthologous regions of closely related grass species
    Du C BMC Evol Biol 6 : 62 ~ [2006]
  • Repeated sequences in DNA: hundreds of thousands of copies of DNA sequences have been incorporated into the genomes of higher organisms
    Britten RJ Science 161 : 529 ~ 540 [1968]
  • Recent insights into mechanisms of genome size change in plants
    Grover CE J Bot 2010 : 382732 ~ [2010]
  • Rapid DNA loss as a counterbalance to genome expansion through retrotransposon proliferation in plants
    Hawkins JS Proc Natl Acad Sci U S A 106 : 17811 ~ 17816 [2009]
  • RNAi-mediated pathways in the nucleus
    Matzke MA Nat Rev Genet 6 : 24 ~ 35 [2005]
  • Punctuated genome size evolution in Liliaceae
    Leitch IJ J Evol Biol 20 : 2296 ~ 2308 [2007]
  • Plant telomere biology
    McKnight TD Plant Cell 16 : 794 ~ 803 [2004]
  • Plant retrotransposon from Lilium henryi is related to Ty3 of yeast and the gypsy group of Drosophila
    Smyth DR Proc Natl Acad Sci U S A 86 : 5015 ~ 5019 [1989]
  • Plant nuclear genome composition 15
  • Plant genome size variation: bloating and purging DNA
    Michael TP Brief Funct Genomics 13 : 308 ~ 317 [2014]
  • Plant Transposons and Genome Dynamics in Evolution
    Schulman AH Wiley Blackwell : 15 ~ 40 [2013]
  • Plant Transposons and Genome Dynamics in Evolution
    Levy AA Wiley-Blackwell Inc : 165 ~ 180 [2013]
  • Plant Transposons and Genome Dynamics in Evolution
    Dooner HK Wiley-Blackwell Inc. : 143 ~ 164 [2013]
  • Plant Genome Diversity. Vol. 1
    Kejnovsky E Springer Verlag : 17 ~ 34 [2012]
  • Plant DNA C-value Database (release 6.0. December 2012)
  • Phylogeny, concerted convergence, and phylogenetic niche conservatism in the core Liliales: insights from rbcL and ndhF sequence data
    Patterson TB Evolution 56 : 233 ~ 252 [2002]
  • Phylogenetic relationships of monocots based on the highly informative plastid gene ndhF: evidence for widespread concerted convergence
    Givnish TJ Aliso 22 : 28 ~ 51 [2006]
  • Parasitism and the retrotransposon life cycle in plants: a hitchhiker's guide to the genome
    Sabot F Heredity (Edinb) 97 : 381 ~ 388 [2006]
  • On the coevolution of transposable elements and plant genomes
    Civáň P J Bot 2011 : 893546 ~ [2011]
  • Nucleotide sequence repetition: a rapidly reassociating fraction of mouse DNA
    Waring M Science 154 : 791 ~ 794 [1966]
  • Nuclear DNA amounts in angiosperms: targets, trends and tomorrow
    Bennett MD Ann Bot 107 : 467 ~ 590 [2011]
  • Mutational analysis of highly conserved aspartate residues essential to the catalytic core of the piggyBac transposase
    Keith JH BMC Mol Biol 9 : 73 ~ [2008]
  • Mutable loci in maize
    McClintock B Year B Carnegie Inst Wash 47 : 155 ~ 169 [1948]
  • Molecular architecture of a eukaryotic DNA transposase
    Hickman AB Nat Struct Mol Biol 12 : 715 ~ 721 [2005]
  • Mobile inverted-repeat elements of the Tourist family are associated with the genes of many cereal grasses
    Bureau TE Proc Natl Acad Sci U S A 91 : 1411 ~ 1415 [1994]
  • Mobile DNA II
    Eickbush TH ASM Press : 1111 ~ 1146 [2002]
  • Mobile DNA II
    Feschotte C ASM Press : 1147 ~ 1158 [2002]
  • Mobile DNA II
    Plasterk RH ASM Press : 519 ~ 532 [2002]
  • Mobile DNA II
    Voytas DF ASM Press : 631 ~ 662 [2002]
  • Mobile DNA II
    Sandmeyer SB ASM Press : 663 ~ 683 [2002]
  • Mobile DNA II
    Levin HL ASM Press : 684 ~ 701 [2002]
  • McClintock's controlling elements: the full story
    Jones RN Cytogenet Genome Res 109 : 90 ~ 103 [2005]
  • Life without GAG: the BARE-2 retrotransposon as a parasite's parasite
    Tanskanen JA Gene 390 : 166 ~ 174 [2007]
  • Large punctuational contribution of speciation to evolutionary divergence at the molecular level
    Pagel M Science 314 : 119 ~ 121 [2006]
  • LTR-retrotransposons and MITEs: important players in the evolution of plant genomes
    Wessler SR Curr Opin Genet Dev 5 : 814 ~ 821 [1995]
  • LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss
    Vitte C BMC Genomics 8 : 218 ~ [2007]
  • Journey through the past: 150 million years of plant genome evolution
    Proost S Plant J 66 : 58 ~ 65 [2011]
  • Isolation and characterization of novel Ty1-copia-like retrotransposons from lily
    Lee SI Genome 56 : 495 ~ 503 [2013]
  • Interspecies distribution of abundant DNA sequences in Lilium
    Joseph JL J Mol Evol 30 : 146 ~ 154 [1990]
  • Higher intron loss rate in Arabidopsis thaliana than A. lyrata is consistent with stronger selection for a smaller genome
    Fawcett JA Mol Biol Evol 29 : 849 ~ 859 [2012]
  • High-Cot sequence analysis of the maize genome
    Yuan Y Plant J 34 : 249 ~ 255 [2003]
  • Genome size reduction through illegitimate recombination counteracts genome expansion in Arabidopsis
    Devos KM Genome Res 12 : 1075 ~ 1079 [2002]
  • Gene movement by Helitron transposons contributes to the haplotype variability of maize
    Lai J Proc Natl Acad Sci U S A 102 : 9068 ~ 9073 [2005]
  • Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize
    Morgante M Nat Genet 37 : 997 ~ 1002 [2005]
  • Gatekeepers of chromatin: small metabolites elicit big changes in gene expression
    Kaochar S Trends Biochem Sci 37 : 477 ~ 483 [2012]
  • Fixation probability favors increased fecundity over reduced generation time
    Wahl LM Genetics 168 : 1009 ~ 1018 [2004]
  • Eukaryotic transposable elements and genome evolution
    Finnegan DJ Trends Genet 5 : 103 ~ 107 [1989]
  • Eukaryotic genome size databases
    Gregory TR Nucleic Acids Res 35 : D332 ~ D338 [2007]
  • Estimation of the nuclear DNA content of Gossypium species
    Hendrix B Ann Bot 95 : 789 ~ 797 [2005]
  • Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression
    Hollister JD Genome Res 19 : 1419 ~ 1428 [2009]
  • Efficient copying of nonhomologous sequences from ectopic sites via P-element-induced gap repair
    Nassif N Mol Cell Biol 14 : 1613 ~ 1625 [1994]
  • Efficient capture of unique sequences from eukaryotic genomes
    Peterson DG Trends Genet 18 : 547 ~ 550 [2002]
  • Dynamic and Evolution of Transposable Elements
    Capy P Library of Congress [1998]
  • Dramatic amplification of a rice transposable element during recent domestication
    Naito K Proc Natl Acad Sci U S A 103 : 17620 ~ 17625 [2006]
  • Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice
    Piegu B Genome Res 16 : 1262 ~ 1269 [2006]
  • Do plants have a one-way ticket to genomic obesity?
    Bennetzen JL Plant Cell 9 : 1509 ~ 1514 [1997]
  • Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies
    Ambrozova K Ann Bot 107 : 255 ~ 268 [2011]
  • Dispersed repeats in plant genomes
    Smyth DR Chromosoma 100 : 355 ~ 359 [1991]
  • DNA transposons and the evolution of eukaryotic genomes
    Feschotte C Annu Rev Genet 41 : 331 ~ 368 [2007]
  • Correlated evolution of LTR retrotransposons and genome size in the genus Eleocharis
    Zedek F BMC Plant Biol 10 : 265 ~ [2010]
  • Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution
    El Baidouri M Genome Biol Evol 5 : 954 ~ 965 [2013]
  • Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes
    Heslop-Harrison JS Plant Cell 12 : 617 ~ 636 [2000]
  • BARE-1, a copia-like retroelement in barley
    Manninen I Plant Mol Biol 22 : 829 ~ 846 [1993]
  • Association of intron loss with high mutation rate in Arabidopsis: implications for genome size evolution
    Yang YF Genome Biol Evol 5 : 723 ~ 733 [2013]
  • Architecture and evolution of a minute plant genome
    Ibarra-Laclette E Nature 498 : 94 ~ 98 [2013]
  • Analyses of LTR-retrotransposon structures reveal recent and rapid genomic DNA loss in rice
    Ma J Genome Res 14 : 860 ~ 869 [2004]
  • An abundant LINE-like element amplified in the genome of Lilium speciosum
    Leeton PR Mol Gen Genet 237 : 97 ~ 104 [1993]
  • Alu elements and the human genome
    Rowold DJ Genetica 108 : 57 ~ 72 [2000]
  • A unified classification system for eukaryotic transposable elements
    Wicker T Nat Rev Genet 8 : 973 ~ 982 [2007]