연구동향 분석

Contributed Mini Review : Cell type-specific gene expression profiling in brain tissue: comparison between TRAP, LCM and RNA-seq

( Tae Hyun Kim ) ( Chae Seok Lim ) Bong-Kiun Kaang 2015년

논문상세정보
인용/피인용
' Contributed Mini Review : Cell type-specific gene expression profiling in brain tissue: comparison between TRAP, LCM and RNA-seq' 의 주제별 논문영향력
논문영향력 선정 방법
논문영향력 요약
주제
  • 생물학
  • brain
  • celltype-specific
  • gene expression profiling
  • neuron
  • transcriptome
동일주제 총논문수 논문피인용 총횟수 주제별 논문영향력의 평균
720 0

0.0%

' Contributed Mini Review : Cell type-specific gene expression profiling in brain tissue: comparison between TRAP, LCM and RNA-seq' 의 참고문헌

  • Using DSP, a reversible cross-linker, to fix tissue sections for immunostaining, microdissection and expression profiling
    Xiang CC Nucleic Acids Res 32 : e185 ~ [2004]
  • Translational profiling of hypocretin neurons identifies candidate molecules for sleep regulation
    Dalal J Genes Dev 27 : 565 ~ 578 [2013]
  • Transcriptomic evidence for immaturity of the prefrontal cortex in patients with schizophrenia
    Hagihara H Mol Brain 7 : 41 ~ [2014]
  • Transcriptome profiling using single-molecule direct RNA sequencing
    Ozsolak F Methods Mol Biol 733 : 51 ~ 61 [2011]
  • Transcriptome profiling of human hippocampus dentate gyrus granule cells in mental illness
    Kohen R Transl Psychiatry 4 : e366 ~ [2014]
  • Transcriptome in vivo analysis(TIVA)of spatially defined single cells in live tissue
    Lovatt D Nat Methods 11 : 190 ~ 196 [2014]
  • The microglial sensome revealed by direct RNA sequencing
    Hickman SE Nat Neurosci 16 : 1896 ~ 1905 [2013]
  • The LEICA microdissection system: design and applications
    Kolble K J Mol Med (Berl) 78 : 24 ~ 25 [2000]
  • Synaptic tagging -- who's it?
    Martin KC Nat Rev Neurosci 3 : 813 ~ 820 [2002]
  • Single-neuron transcriptome and methylome sequencing for epigenomic analysis of aging
    Moroz LL Methods Mol Biol 1048 : 323 ~ 352 [2013]
  • Single-neuron RNA-Seq: technical feasibility and reproducibility
    Qiu S Front Genet 3 : 124 ~ [2012]
  • Single-molecule direct RNA sequencing without cDNA synthesis
    Ozsolak F Wiley Interdiscip Rev RNA 2 : 565 ~ 570 [2011]
  • Single-cell RNA-seq: advances and future challenges
    Saliba AE Nucleic Acids Res 42 : 8845 ~ 8860 [2014]
  • Single cell genomics: advances and future perspectives
    Macaulay IC PLoS Genet 10 : e1004126 ~ [2014]
  • Serotonergic neuron regulation informed by in vivo single-cell transcriptomics
    Spaethling JM FASEB J 28 : 771 ~ 780 [2014]
  • Reversing the effects of formalin fixation with citraconic anhydride and heat: a universal antigen retrieval method
    Namimatsu S J Histochem Cytochem 53 : 3 ~ 11 [2005]
  • Protein expression profile in the amygdala of rats with methamphetamine-induced behavioral sensitization
    Iwazaki T Neurosci Lett 435 : 113 ~ 119 [2008]
  • Polyribosomes redistribute from dendritic shafts into spines with enlarged synapses during LTP in developing rat hippocampal slices
    Ostroff LE Neuron 35 : 535 ~ 545 [2002]
  • Neocortical excitation/inhibition balance in information processing and social dysfunction
    Yizhar O Nature 477 : 171 ~ 178 [2011]
  • Micro RNA detection in long-term fixed tissue of cortical glutamatergic pyramidal neurons after targeted laser-capture neuroanatomical microdissection
    Herai RR J Neurosci Methods 235 : 76 ~ 82 [2014]
  • Method for single-cell microarray analysis and application to gene-expression profiling of GABAergic neuron progenitors
    Esumi S Neurosci Res 60 : 439 ~ 451 [2008]
  • Laser-capture microdissection
    Espina V Nat Protoc 1 : 586 ~ 603 [2006]
  • Laser capture microdissection: molecular analysis of tissue
    Bonner RF Science 278 : 1481 ~ 1483 [1997]
  • Laser capture microdissection
    Emmert-Buck MR Science 274 : 998 ~ 1001 [1996]
  • Inhibitory interneuron deficit links altered network activity and cognitive dysfunction in Alzheimer model
    Verret L Cell 149 : 708 ~ 721 [2012]
  • In vivo evidence of pathogenicity of VPS35 mutations in the Drosophila
    Wang HS Mol Brain 7 : 73 ~ [2014]
  • Identification of the cortical neurons that mediate antidepressant responses
    Schmidt EF Cell 149 : 1152 ~ 1163 [2012]
  • Genome-wide atlas of gene expression in the adult mouse brain
    Lein ES Nature 445 : 168 ~ 176 [2007]
  • Gene expression profiling of facilitated L-LTP in VP16-CREB mice reveals that BDNF is critical for the maintenance of LTP and its synaptic capture
    Barco A Neuron 48 : 123 ~ 137 [2005]
  • Gene expression profiles of brain dopamine neurons and relevance to neuropsychiatric disease
    Greene JG J Physiol 575 : 411 ~ 416 [2006]
  • Gene discovery in genetically labeled single dopaminergic neurons of the retina
  • FMR1 transcript isoforms: association with polyribosomes; regional and developmental expression in mouse brain
    Brackett DM PLoS One 8 : e58296 ~ [2013]
  • Expression profile analysis of hippocampal CA1 pyramidal neurons in aged Ts65Dn mice, a model of Down syndrome (DS) and Alzheimer's disease (AD)
    Alldred MJ Brain Struct Funct [2014]
  • Evaluation of TRAP-sequencing technology with a versatile conditional mouse model
    Hupe M Nucleic Acids Res 42 : e14 ~ [2014]
  • Direct RNA sequencing
    Ozsolak F Nature 461 : 814 ~ 818 [2009]
  • Digital expression profiling of the compartmentalized translatome of Purkinje neurons
    Kratz A Genome Res 8 : 1396 ~ 1410 [2014]
  • Development of translating ribosome affinity purification for zebrafish
    Tryon RC Genesis 51 : 187 ~ 192 [2013]
  • Cut out or poke in--the key to the world of single genes: laser micromanipulation as a valuable tool on the look-out for the origin of disease
    Schutze K Genet Anal 14 : 1 ~ 8 [1997]
  • Cell-type-specific isolation of ribosome-associated mRNA from complex tissues
    Amieux, P.S. McKnight, G.S. Morris, D.R. Sanz E Su, T. Yang, L. Proc Natl Acad Sci U S A 106 : 13939 ~ 13944 [2009]
  • Cell type-specific translational profiling in the Xenopus laevis retina
    Watson FL Dev Dyn 241 : 1960 ~ 1972 [2012]
  • Application of a translational profiling approach for the comparative analysis of CNS cell types
    Doyle JP Cell 135 : 749 ~ 762 [2008]
  • Analysis of transcription factor mRNAs in identified oxytocin and vasopressin magnocellular neurons isolated by laser capture microdissection
    Humerick M PLoS One 8 : e69407 ~ [2013]
  • Analysis of neuronal gene expression with laser capture microdissection
    Vincent VA J Neurosci Res 69 : 578 ~ 586 [2002]
  • An anatomically comprehensive atlas of the adult human brain transcriptome
    Hawrylycz MJ Nature 489 : 391 ~ 399 [2012]
  • Aldehyde dehydrogenase 1defines and protects a nigrostriatal dopaminergic neuron subpopulation
    Liu G J Clin Invest 124 : 3032 ~ 3046 [2014]
  • A versatile method for cell-specific profiling of translated mRNAs in Drosophila
    Thomas A PLoS One 7 : e40276 ~ [2012]
  • A translational profiling approach for the molecular characterization of CNS cell types
    Heiman M Cell 135 : 738 ~ 748 [2008]
  • A quantitative comparison of cell-type-specific microarray gene expression profiling methods in the mouse brain
    Okaty BW PLoS One 6 : e16493 ~ [2011]