연구동향 분석
박사

장병원성대장균에서 cyclic diguanosine monophosphate 신호전달의 역할 = Role of cyclic diguanosine monophosphate signaling in enteropathogenic Escherichia coli

한달무리 2019년

논문상세정보
인용/피인용
' 장병원성대장균에서 cyclic diguanosine monophosphate 신호전달의 역할 = Role of cyclic diguanosine monophosphate signaling in enteropathogenic Escherichia coli' 의 주제별 논문영향력
논문영향력 선정 방법
논문영향력 요약
주제
  • 기초의학
  • c-di-GMP
  • lps
  • rna sequencing
  • 사이토카인
  • 장병원성대장균
동일주제 총논문수 논문피인용 총횟수 주제별 논문영향력의 평균
251 0

0.0%

' 장병원성대장균에서 cyclic diguanosine monophosphate 신호전달의 역할 = Role of cyclic diguanosine monophosphate signaling in enteropathogenic Escherichia coli' 의 참고문헌

  • de Jesus, M.C., Urban, A.A., Marasigan, M.E., Barnett Foster, D.E., 2005. Acid and bile-salt stress of enteropathogenic Escherichia coli enhances adhesion to epithelial cells and alters glycolipid receptor binding specificity. The Journal of infectious diseases 192, 1430-1440.
  • Yeo, J.M., Lee, H.J., Kim, J.W., Lee, J.B., Park, S.Y., Choi, I.S., Song, C.S., 2014. Lactobacillus fermentum CJL-112 protects mice against influenza virus infection by activating T-helper 1 and eliciting a protective immune response. International immunopharmacology 18, 50-54.
  • Winkler, W., Nahvi, A., Breaker, R.R., 2002. Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature 419, 952-956.
  • Whitfield, C., Kaniuk, N., Frirdich, E., 2003. Molecular insights into the assembly and diversity of the outer core oligosaccharide in lipopolysaccharides from Escherichia coli and Salmonella. Journal of endotoxin research 9, 244-249.
  • West, N.P., Sansonetti, P., Mounier, J., Exley, R.M., Parsot, C., Guadagnini, S., Prevost, M.C., Prochnicka-Chalufour, A., Delepierre, M., Tanguy, M., Tang, C.M., 2005. Optimization of virulence functions through glucosylation of Shigella LPS. Science (New York, N.Y.) 307, 1313-1317.
  • Wei, B.L., Brun-Zinkernagel, A.M., Simecka, J.W., Pruss, B.M., Babitzke, P., Romeo, T., 2001. Positive regulation of motility and flhDC expression by the RNA-binding protein CsrA of Escherichia coli. Molecular microbiology 40, 245- 256.
  • Weber, H., Pesavento, C., Possling, A., Tischendorf, G., Hengge, R., 2006. Cyclic-di-GMP-mediated signalling within the sigma network of Escherichia coli. Molecular microbiology 62, 1014-1034.
  • Waters, C.M., Lu, W., Rabinowitz, J.D., Bassler, B.L., 2008. Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT. Journal of bacteriology 190, 2527-2536.
  • Wan, X., Tuckerman, J.R., Saito, J.A., Freitas, T.A., Newhouse, J.S., Denery, J.R., Galperin, M.Y., Gonzalez, G., Gilles-Gonzalez, M.A., Alam, M., 2009. Globins synthesize the second messenger bis-(3'-5')-cyclic diguanosine monophosphate in bacteria. Journal of molecular biology 388, 262-270.
  • Vogel, H.J., Bonner, D.M., 1956. Acetylornithinase of Escherichia coli: partial purification and some properties. The Journal of biological chemistry 218, 97- 106.
  • Valentini, M., Filloux, A., 2016. Biofilms and Cyclic di-GMP (c-di-GMP) Signaling: Lessons from Pseudomonas aeruginosa and Other Bacteria. The Journal of biological chemistry 291, 12547-12555.
  • Uhlich, G.A., Chen, C.Y., Cottrell, B.J., Hofmann, C.S., Dudley, E.G., Strobaugh, T.P., Jr., Nguyen, L.H., 2013. Phage insertion in mlrA and variations in rpoS limit curli expression and biofilm formation in Escherichia coli serotype O157: H7. Microbiology (Reading, England) 159, 1586-1596.
  • Tsai, C.M., Frasch, C.E., 1982. A sensitive silver stain for detecting lipopolysaccharides in polyacrylamide gels. Analytical biochemistry 119, 115- 119.
  • Towbin, H., Staehelin, T., Gordon, J., 1979. Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proceedings of the National Academy of Sciences of the United States of America 76, 4350-4354.
  • Tamaki, S., Sato, T., Matsuhashi, M., 1971. Role of lipopolysaccharides in antibiotic resistance and bacteriophage adsorption of Escherichia coli K-12. Journal of bacteriology 105, 968-975.
  • Tagliabue, L., Antoniani, D., Maciag, A., Bocci, P., Raffaelli, N., Landini, P., 2010. The diguanylate cyclase YddV controls production of the exopolysaccharide poly-N-acetylglucosamine (PNAG) through regulation of the PNAG biosynthetic pgaABCD operon. Microbiology (Reading, England) 156, 2901-2911.
  • Stenutz, R., Weintraub, A., Widmalm, G., 2006. The structures of Escherichia coli O-polysaccharide antigens. FEMS microbiology reviews 30, 382-403.
  • Steinchen, W., Bange, G., 2016. The magic dance of the alarmones (p)ppGpp. Molecular microbiology 101, 531-544.
  • Stein, R.A., Katz, D.E., 2017. Escherichia coli, cattle and the propagation of disease. FEMS microbiology letters 364.
  • Srivastava, D., Waters, C.M., 2012. A tangled web: regulatory connections between quorum sensing and cyclic Di-GMP. Journal of bacteriology 194, 4485- 4493.
  • Sivaneson, M., Mikkelsen, H., Ventre, I., Bordi, C., Filloux, A., 2011. Twocomponent regulatory systems in Pseudomonas aeruginosa: an intricate network mediating fimbrial and efflux pump gene expression. Molecular microbiology 79, 1353-1366.
  • Sisti, F., Ha, D.G., O'Toole, G.A., Hozbor, D., Fernandez, J., 2013. Cyclic-di- GMP signalling regulates motility and biofilm formation in Bordetella bronchiseptica. Microbiology (Reading, England) 159, 869-879.
  • Simm, R., Lusch, A., Kader, A., Andersson, M., Romling, U., 2007. Role of EAL-containing proteins in multicellular behavior of Salmonella enterica serovar Typhimurium. Journal of bacteriology 189, 3613-3623.
  • Shin, S., Castanie-Cornet, M.P., Foster, J.W., Crawford, J.A., Brinkley, C., Kaper, J.B., 2001. An activator of glutamate decarboxylase genes regulates the expression of enteropathogenic Escherichia coli virulence genes through control of the plasmid-encoded regulator, Per. Molecular microbiology 41, 1133-1150.
  • Sharma, G., Sharma, S., Sharma, P., Chandola, D., Dang, S., Gupta, S., Gabrani, R., 2016. Escherichia coli biofilm: development and therapeutic strategies. Journal of applied microbiology 121, 309-319.
  • Setta, A., Barrow, P.A., Kaiser, P., Jones, M.A., 2012. Immune dynamics following infection of avian macrophages and epithelial cells with typhoidal and non-typhoidal Salmonella enterica serovars; bacterial invasion and persistence, nitric oxide and oxygen production, differential host gene expression, NFkappaB signalling and cell cytotoxicity. Veterinary immunology and immunopathology 146, 212-224.
  • Schleicher, M., Watterson, D.M., 1983. Analysis of differences between coomassie blue stain and silver stain procedures in polyacrylamide gels: conditions for the detection of calmodulin and troponin C. Analytical biochemistry 131, 312-317.
  • Schild, S., Tamayo, R., Nelson, E.J., Qadri, F., Calderwood, S.B., Camilli, A., 2007. Genes induced late in infection increase fitness of Vibrio cholerae after release into the environment. Cell host & microbe 2, 264-277.
  • Schafhauser, J., Lepine, F., McKay, G., Ahlgren, H.G., Khakimova, M., Nguyen, D., 2014. The stringent response modulates 4-hydroxy-2-alkylquinoline biosynthesis and quorum-sensing hierarchy in Pseudomonas aeruginosa. Journal of bacteriology 196, 1641-1650.
  • Scamurra, R., Arriaga, C., Sprunger, L., Baarsch, M.J., Murtaugh, M.P., 1996. Regulation of interleukin-6 expression in porcine immune cells. Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research 16, 289-296.
  • Sambrook, J., Russell, D.W., 2001. Molecular cloning : a laboratory manual, 3rd Edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
  • Sacco, R.E., Nibbelink, S.K., Baarsch, M.J., Murtaugh, M.P., Wannemuehler, M.J., 1996. Induction of interleukin (IL)-1beta and IL-8 mRNA expression in porcine macrophages by lipopolysaccharide from Serpulina hyodysenteriae. Infection and immunity 64, 4369-4372.
  • Ryjenkov, D.A., Simm, R., Romling, U., Gomelsky, M., 2006. The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria. The Journal of biological chemistry 281, 30310-30314.
  • Romling, U., Galperin, M.Y., Gomelsky, M., 2013. Cyclic di-GMP: the first 25 years of a universal bacterial second messenger. Microbiology and molecular biology reviews : MMBR 77, 1-52.
  • Richard, H.T., Foster, J.W., 2003. Acid resistance in Escherichia coli. Advances in applied microbiology 52, 167-186.
  • Reeves, P., 1995. Role of O-antigen variation in the immune response. Trends in microbiology 3, 381-386.
  • Raterman, E.L., Shapiro, D.D., Stevens, D.J., Schwartz, K.J., Welch, R.A., 2013. Genetic analysis of the role of yfiR in the ability of Escherichia coli CFT073 to control cellular cyclic dimeric GMP levels and to persist in the urinary tract. Infection and immunity 81, 3089-3098.
  • Qi, Y., Rao, F., Luo, Z., Liang, Z.X., 2009. A flavin cofactor-binding PAS domain regulates c-di-GMP synthesis in AxDGC2 from Acetobacter xylinum. Biochemistry 48, 10275-10285.
  • Qi, Y., Chuah, M.L., Dong, X., Xie, K., Luo, Z., Tang, K., Liang, Z.X., 2011. Binding of cyclic diguanylate in the non-catalytic EAL domain of FimX induces a long-range conformational change. The Journal of biological chemistry 286, 2910-2917.
  • Purcell, E.B., McKee, R.W., McBride, S.M., Waters, C.M., Tamayo, R., 2012. Cyclic diguanylate inversely regulates motility and aggregation in Clostridium difficile. Journal of bacteriology 194, 3307-3316.
  • Pratt, J.T., Tamayo, R., Tischler, A.D., Camilli, A., 2007. PilZ domain proteins bind cyclic diguanylate and regulate diverse processes in Vibrio cholerae. The Journal of biological chemistry 282, 12860-12870.
  • Povolotsky, T.L., Hengge, R., 2016. Genome-Based Comparison of Cyclic Di- GMP Signaling in Pathogenic and Commensal Escherichia coli Strains. Journal of bacteriology 198, 111-126.
  • Povolotsky, T.L., Hengge, R., 2015. Genome-Based Comparison of Cyclic Di- GMP Signaling in Pathogenic and Commensal Escherichia coli Strains. Journal of bacteriology 198, 111-126.
  • Petersen, E., Chaudhuri, P., Gourley, C., Harms, J., Splitter, G., 2011. Brucella melitensis cyclic di-GMP phosphodiesterase BpdA controls expression of flagellar genes. Journal of bacteriology 193, 5683-5691.
  • Perry, R.D., Pendrak, M.L., Schuetze, P., 1990. Identification and cloning of a hemin storage locus involved in the pigmentation phenotype of Yersinia pestis. Journal of bacteriology 172, 5929-5937.
  • Peroval, M.Y., Boyd, A.C., Young, J.R., Smith, A.L., 2013. A critical role for MAPK signalling pathways in the transcriptional regulation of toll like receptors. PloS one 8, e51243.
  • Paul, K., Nieto, V., Carlquist, W.C., Blair, D.F., Harshey, R.M., 2010. The c-di- GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism. Molecular cell 38, 128-139.
  • Park, S.H., Ryu, S., Kang, D.H., 2012. Development of an improved selective and differential medium for isolation of Salmonella spp. Journal of clinical microbiology 50, 3222-3226.
  • Papo, N., Shai, Y., 2005. A molecular mechanism for lipopolysaccharide protection of Gram-negative bacteria from antimicrobial peptides. The Journal of biological chemistry 280, 10378-10387.
  • Paixao, T.A., Roux, C.M., den Hartigh, A.B., Sankaran-Walters, S., Dandekar, S., Santos, R.L., Tsolis, R.M., 2009. Establishment of systemic Brucella melitensis infection through the digestive tract requires urease, the type IV secretion system, and lipopolysaccharide O antigen. Infection and immunity 77, 4197-4208.
  • Orr, M.W., Lee, V.T., 2016. A PilZ domain protein for chemotaxis adds another layer to c-di-GMP-mediated regulation of flagellar motility. Science signaling 9, fs16.
  • Newell, P.D., Monds, R.D., O'Toole, G.A., 2009. LapD is a bis-(3',5')-cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1. Proceedings of the National Academy of Sciences of the United States of America 106, 3461-3466.
  • Navasa, N., Rodriguez-Aparicio, L.B., Ferrero, M.A., Monteagudo-Mera, A., Martinez-Blanco, H., 2014. Transcriptional control of RfaH on polysialic and colanic acid synthesis by Escherichia coli K92. FEBS letters 588, 922-928.
  • Nam, S.H., Choi, S.P., Kang, M.Y., Koh, H.J., Kozukue, N., Friedman, M., 2006. Antioxidative activities of bran extracts from twenty one pigmented rice cultivars. Food Chemistry 94, 613-620.
  • Nakayama, S., Roelofs, K., Lee, V.T., Sintim, H.O., 2012. A c-di-GMPproflavine- hemin supramolecular complex has peroxidase activity--implication for a simple colorimetric detection. Molecular bioSystems 8, 726-729.
  • Murray, G.L., Attridge, S.R., Morona, R., 2006. Altering the length of the lipopolysaccharide O antigen has an impact on the interaction of Salmonella enterica serovar Typhimurium with macrophages and complement. Journal of bacteriology 188, 2735-2739.
  • Moghadamtousi, S.Z., Kadir, H.A., Hassandarvish, P., Tajik, H., Abubakar, S., Zandi, K., 2014. A review on antibacterial, antiviral, and antifungal activity of curcumin. BioMed research international 2014, 186864.
  • Merighi, M., Lee, V.T., Hyodo, M., Hayakawa, Y., Lory, S., 2007. The second messenger bis-(3'-5')-cyclic-GMP and its PilZ domain-containing receptor Alg44 are required for alginate biosynthesis in Pseudomonas aeruginosa. Molecular microbiology 65, 876-895.
  • McCoy, S.L., Kurtz, S.E., Hausman, F.A., Trune, D.R., Bennett, R.M., Hefeneider, S.H., 2004. Activation of RAW264.7 macrophages by bacterial DNA and lipopolysaccharide increases cell surface DNA binding and internalization. The Journal of biological chemistry 279, 17217-17223.
  • McCarthy, R.R., Mazon-Moya, M.J., Moscoso, J.A., Hao, Y., Lam, J.S., Bordi, C., Mostowy, S., Filloux, A., 2017. Cyclic-di-GMP regulates lipopolysaccharide modification and contributes to Pseudomonas aeruginosa immune evasion. Nature microbiology 2, 17027.
  • Massie, J.P., Reynolds, E.L., Koestler, B.J., Cong, J.P., Agostoni, M., Waters, C.M., 2012. Quantification of high-specificity cyclic diguanylate signaling. Proceedings of the National Academy of Sciences of the United States of America 109, 12746-12751.
  • Martinic, M., Hoare, A., Contreras, I., Alvarez, S.A., 2011. Contribution of the lipopolysaccharide to resistance of Shigella flexneri 2a to extreme acidity. PloS one 6, e25557.
  • Mao, Y., Doyle, M.P., Chen, J., 2006. Role of colanic acid exopolysaccharide in the survival of enterohaemorrhagic Escherichia coli O157:H7 in simulated gastrointestinal fluids. Letters in applied microbiology 42, 642-647.
  • Mao, Y., Doyle, M.P., Chen, J., 2001. Insertion mutagenesis of wca reduces acid and heat tolerance of enterohemorrhagic Escherichia coli O157:H7. Journal of bacteriology 183, 3811-3815.
  • Maldonado, R.F., Sa-Correia, I., Valvano, M.A., 2016. Lipopolysaccharide modification in Gram-negative bacteria during chronic infection. FEMS microbiology reviews 40, 480-493.
  • Liu, N., Xu, Y., Hossain, S., Huang, N., Coursolle, D., Gralnick, J.A., Boon, E.M., 2012. Nitric oxide regulation of cyclic di-GMP synthesis and hydrolysis in Shewanella woodyi. Biochemistry 51, 2087-2099.
  • Liu, K., Bittner, A.N., Wang, J.D., 2015. Diversity in (p)ppGpp metabolism and effectors. Current opinion in microbiology 24, 72-79.
  • Levi, A., Folcher, M., Jenal, U., Shuman, H.A., 2011. Cyclic diguanylate signaling proteins control intracellular growth of Legionella pneumophila. mBio 2, e00316-00310.
  • Lee, J., Page, R., Garcia-Contreras, R., Palermino, J.M., Zhang, X.S., Doshi, O., Wood, T.K., Peti, W., 2007. Structure and function of the Escherichia coli protein YmgB: a protein critical for biofilm formation and acid-resistance. Journal of molecular biology 373, 11-26.
  • Lavric, M., Maughan, M.N., Bliss, T.W., Dohms, J.E., Bencina, D., Keeler, C.L., Jr., Narat, M., 2008. Gene expression modulation in chicken macrophages exposed to Mycoplasma synoviae or Escherichia coli. Veterinary microbiology 126, 111-121.
  • Lamprokostopoulou, A., Monteiro, C., Rhen, M., Romling, U., 2010. Cyclic di- GMP signalling controls virulence properties of Salmonella enterica serovar Typhimurium at the mucosal lining. Environmental microbiology 12, 40-53.
  • Lahiri, A., Das, P., Chakravortty, D., 2008. Arginase modulates Salmonella induced nitric oxide production in RAW264.7 macrophages and is required for Salmonella pathogenesis in mice model of infection. Microbes and infection 10, 1166-1174.
  • Kulasakara, H., Lee, V., Brencic, A., Liberati, N., Urbach, J., Miyata, S., Lee, D.G., Neely, A.N., Hyodo, M., Hayakawa, Y., Ausubel, F.M., Lory, S., 2006. Analysis of Pseudomonas aeruginosa diguanylate cyclases and phosphodiesterases reveals a role for bis-(3'-5')-cyclic-GMP in virulence. Proceedings of the National Academy of Sciences of the United States of America 103, 2839-2844.
  • Krasteva, P.V., Fong, J.C., Shikuma, N.J., Beyhan, S., Navarro, M.V., Yildiz, F.H., Sondermann, H., 2010. Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP. Science (New York, N.Y.) 327, 866-868.
  • Komuro, T., Galanos, C., 1988. Analysis of Salmonella lipopolysaccharides by sodium deoxycholate-polyacrylamide gel electrophoresis. Journal of chromatography 450, 381-387.
  • Kintz, E., Brainard, J., Hooper, L., Hunter, P., 2017. Transmission pathways for sporadic Shiga-toxin producing E. coli infections: A systematic review and meta-analysis. International journal of hygiene and environmental health 220, 57-67.
  • King, J.D., Vinogradov, E., Preston, A., Li, J., Maskell, D.J., 2009. Postassembly modification of Bordetella bronchiseptica O polysaccharide by a novel periplasmic enzyme encoded by wbmE. The Journal of biological chemistry 284, 1474-1483.
  • Kim, S.P., Park, S.O., Lee, S.J., Nam, S.H., Friedman, M., 2014. A Polysaccharide isolated from the liquid culture of Lentinus edodes (Shiitake) mushroom mycelia containing black rice bran protects mice against salmonellosis through upregulation of the Th1 immune reaction. Journal of agricultural and food chemistry 62, 2384-2391.
  • Kim, S.P., Park, S.O., Lee, S.J., Nam, S.H., Friedman, M., 2013. A polysaccharide isolated from the liquid culture of Lentinus edodes (Shiitake) mushroom mycelia containing black rice bran protects mice against a Salmonella lipopolysaccharide-induced endotoxemia. Journal of agricultural and food chemistry 61, 10987-10994.
  • Kapetanovic, R., Fairbairn, L., Beraldi, D., Sester, D.P., Archibald, A.L., Tuggle, C.K., Hume, D.A., 2012. Pig bone marrow-derived macrophages resemble human macrophages in their response to bacterial lipopolysaccharide. Journal of immunology (Baltimore, Md. : 1950) 188, 3382-3394.
  • Kansal, R., Rasko, D.A., Sahl, J.W., Munson, G.P., Roy, K., Luo, Q., Sheikh, A., Kuhne, K.J., Fleckenstein, J.M., 2013. Transcriptional modulation of enterotoxigenic Escherichia coli virulence genes in response to epithelial cell interactions. Infection and immunity 81, 259-270.
  • Kalia, D., Merey, G., Nakayama, S., Zheng, Y., Zhou, J., Luo, Y., Guo, M., Roembke, B.T., Sintim, H.O., 2013. Nucleotide, c-di-GMP, c-di-AMP, cGMP, cAMP, (p)ppGpp signaling in bacteria and implications in pathogenesis. Chemical Society reviews 42, 305-341.
  • Jubelin, G., Desvaux, M., Schuller, S., Etienne-Mesmin, L., Muniesa, M., Blanquet-Diot, S., 2018. Modulation of Enterohaemorrhagic Escherichia coli Survival and Virulence in the Human Gastrointestinal Tract. Microorganisms 6. Junkins, A.D., Doyle, M.P., 1992. Demonstration of exopolysaccharide production by enterohemorrhagic Escherichia coli. Current microbiology 25, 9- 17.
  • Jonas, K., Edwards, A.N., Simm, R., Romeo, T., Romling, U., Melefors, O., 2008. The RNA binding protein CsrA controls cyclic di-GMP metabolism by directly regulating the expression of GGDEF proteins. Molecular microbiology 70, 236- 257.
  • Johnson, J.G., Murphy, C.N., Sippy, J., Johnson, T.J., Clegg, S., 2011. Type 3 fimbriae and biofilm formation are regulated by the transcriptional regulators MrkHI in Klebsiella pneumoniae. Journal of bacteriology 193, 3453-3460.
  • Hu, J., Wang, B., Fang, X., Means, W.J., McCormick, R.J., Gomelsky, M., Zhu, M.J., 2013. c-di-GMP signaling regulates E. coli O157:H7 adhesion to colonic epithelium. Veterinary microbiology 164, 344-351.
  • Hinnebusch, B.J., Perry, R.D., Schwan, T.G., 1996. Role of the Yersinia pestis hemin storage (hms) locus in the transmission of plague by fleas. Science (New York, N.Y.) 273, 367-370.
  • Hengge, R., 2009. Principles of c-di-GMP signalling in bacteria. Nature reviews. Microbiology 7, 263-273.
  • Hengge, R. 2010. Role of Cyclic Di-GMP in the Regulatory Networks of Escherichia coli, In: The Second Messenger Cyclic Di-GMP. American Society of Microbiology.
  • He, H., MacKinnon, K.M., Genovese, K.J., Nerren, J.R., Swaggerty, C.L., Nisbet, D.J., Kogut, M.H., 2009. Chicken scavenger receptors and their ligand-induced cellular immune responses. Molecular immunology 46, 2218-2225.
  • Hauryliuk, V., Atkinson, G.C., Murakami, K.S., Tenson, T., Gerdes, K., 2015. Recent functional insights into the role of (p)ppGpp in bacterial physiology. Nature reviews. Microbiology 13, 298-309.
  • Harms, A., Maisonneuve, E., Gerdes, K., 2016. Mechanisms of bacterial persistence during stress and antibiotic exposure. Science (New York, N.Y.) 354.
  • Hancock, R.E., Mutharia, L.M., Chan, L., Darveau, R.P., Speert, D.P., Pier, G.B., 1983. Pseudomonas aeruginosa isolates from patients with cystic fibrosis: a class of serum-sensitive, nontypable strains deficient in lipopolysaccharide O side chains. Infection and immunity 42, 170-177.
  • Guard-Petter, J., Lakshmi, B., Carlson, R., Ingram, K., 1995. Characterization of lipopolysaccharide heterogeneity in Salmonella enteritidis by an improved gel electrophoresis method. Applied and environmental microbiology 61, 2845-2851.
  • Grossman, N., Schmetz, M.A., Foulds, J., Klima, E.N., Jimenez-Lucho, V.E., Leive, L.L., Joiner, K.A., 1987. Lipopolysaccharide size and distribution determine serum resistance in Salmonella montevideo. Journal of bacteriology 169, 856-863.
  • Gomelsky, M., Galperin, M.Y., 2013. Bacterial second messengers, cGMP and c-di-GMP, in a quest for regulatory dominance. The EMBO journal 32, 2421- 2423.
  • Ghosh, S., Banerjee, S., Sil, P.C., 2015. The beneficial role of curcumin on inflammation, diabetes and neurodegenerative disease: A recent update. Food and chemical toxicology : an international journal published for the British Industrial Biological Research Association 83, 111-124.
  • Germain, E., Castro-Roa, D., Zenkin, N., Gerdes, K., 2013. Molecular mechanism of bacterial persistence by HipA. Molecular cell 52, 248-254.
  • Gerdes, K., Maisonneuve, E., 2012. Bacterial persistence and toxin-antitoxin loci. Annual review of microbiology 66, 103-123.
  • Gellatly, S.L., Hancock, R.E., 2013. Pseudomonas aeruginosa: new insights into pathogenesis and host defenses. Pathogens and disease 67, 159-173.
  • Garcia, B., Latasa, C., Solano, C., Garcia-del Portillo, F., Gamazo, C., Lasa, I., 2004. Role of the GGDEF protein family in Salmonella cellulose biosynthesis and biofilm formation. Molecular microbiology 54, 264-277.
  • Foley, S.L., Johnson, T.J., Ricke, S.C., Nayak, R., Danzeisen, J., 2013. Salmonella pathogenicity and host adaptation in chicken-associated serovars. Microbiology and molecular biology reviews : MMBR 77, 582-607.
  • Ferreira, R.B., Antunes, L.C., Greenberg, E.P., McCarter, L.L., 2008. Vibrio parahaemolyticus ScrC modulates cyclic dimeric GMP regulation of gene expression relevant to growth on surfaces. Journal of bacteriology 190, 851- 860.
  • Fazli, M., O'Connell, A., Nilsson, M., Niehaus, K., Dow, J.M., Givskov, M., Ryan, R.P., Tolker-Nielsen, T., 2011. The CRP/FNR family protein Bcam1349 is a cdi- GMP effector that regulates biofilm formation in the respiratory pathogen Burkholderia cenocepacia. Molecular microbiology 82, 327-341.
  • Faber, E., Tedin, K., Speidel, Y., Brinkmann, M.M., Josenhans, C., 2018. Functional expression of TLR5 of different vertebrate species and diversification in intestinal pathogen recognition. Scientific reports 8, 11287.
  • Dupont, A., Sommer, F., Zhang, K., Repnik, U., Basic, M., Bleich, A., Kuhnel, M., Backhed, F., Litvak, Y., Fulde, M., Rosenshine, I., Hornef, M.W., 2016. Age- Dependent Susceptibility to Enteropathogenic Escherichia coli (EPEC) Infection in Mice. PLoS pathogens 12, e1005616.
  • Conner, J.G., Zamorano-Sanchez, D., Park, J.H., Sondermann, H., Yildiz, F.H., 2017. The ins and outs of cyclic di-GMP signaling in Vibrio cholerae. Current opinion in microbiology 36, 20-29.
  • Claret, L., Miquel, S., Vieille, N., Ryjenkov, D.A., Gomelsky, M., Darfeuille９８ Michaud, A., 2007. The flagellar sigma factor FliA regulates adhesion and invasion of Crohn disease-associated Escherichia coli via a cyclic dimeric GMPdependent pathway. The Journal of biological chemistry 282, 33275-33283.
  • Christen, M., Christen, B., Allan, M.G., Folcher, M., Jeno, P., Grzesiek, S., Jenal, U., 2007. DgrA is a member of a new family of cyclic diguanosine monophosphate receptors and controls flagellar motor function in Caulobacter crescentus. Proceedings of the National Academy of Sciences of the United States of America 104, 4112-4117.
  • Christen, B., Christen, M., Paul, R., Schmid, F., Folcher, M., Jenoe, P., Meuwly, M., Jenal, U., 2006. Allosteric control of cyclic di-GMP signaling. The Journal of biological chemistry 281, 32015-32024.
  • Chen, M.H., Choi, S.H., Kozukue, N., Kim, H.J., Friedman, M., 2012. Growthinhibitory effects of pigmented rice bran extracts and three red bran fractions against human cancer cells: relationships with composition and antioxidative activities. Journal of agricultural and food chemistry 60, 9151-9161.
  • Chang, A.L., Tuckerman, J.R., Gonzalez, G., Mayer, R., Weinhouse, H., Volman, G., Amikam, D., Benziman, M., Gilles-Gonzalez, M.A., 2001. Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor. Biochemistry 40, 3420-3426.
  • Camilli, A., Bassler, B.L., 2006. Bacterial small-molecule signaling pathways. Science (New York, N.Y.) 311, 1113-1116.
  • Breland, E.J., Eberly, A.R., Hadjifrangiskou, M., 2017. An Overview of Two- Component Signal Transduction Systems Implicated in Extra-Intestinal Pathogenic E. coli Infections. Frontiers in cellular and infection microbiology 7, 162.
  • Braun, H.-S., Sponder, G., Aschenbach, J.R., Kerner, K., Bauerfeind, R., Deiner, C., 2017. The GadX regulon affects virulence gene expression and adhesion of porcine enteropathogenic Escherichia coli in vitro. Veterinary and Animal Science 3, 10-17.
  • Branchu, P., Hindre, T., Fang, X., Thomas, R., Gomelsky, M., Claret, L., Harel, J., Gobert, A.P., Martin, C., 2013. The c-di-GMP phosphodiesterase VmpA absent in Escherichia coli K12 strains affects motility and biofilm formation in the enterohemorrhagic O157:H7 serotype. Veterinary immunology and immunopathology 152, 132-140.
  • Bordeleau, E., Brouillette, E., Robichaud, N., Burrus, V., 2010. Beyond antibiotic resistance: integrating conjugative elements of the SXT/R391 family that encode novel diguanylate cyclases participate to c-di-GMP signalling in Vibrio cholerae. Environmental microbiology 12, 510-523.
  • Boehm, A., Steiner, S., Zaehringer, F., Casanova, A., Hamburger, F., Ritz, D., Keck, W., Ackermann, M., Schirmer, T., Jenal, U., 2009. Second messenger signalling governs Escherichia coli biofilm induction upon ribosomal stress. Molecular microbiology 72, 1500-1516.
  • Bobrov, A.G., Kirillina, O., Ryjenkov, D.A., Waters, C.M., Price, P.A., Fetherston, J.D., Mack, D., Goldman, W.E., Gomelsky, M., Perry, R.D., 2011. Systematic analysis of cyclic di-GMP signalling enzymes and their role in biofilm formation and virulence in Yersinia pestis. Molecular microbiology 79, 533-551.
  • Bhagwat, A.A., 2003. Regulation of the glutamate-dependent acid-resistance system of diarrheagenic Escherichia coli strains. FEMS microbiology letters 227, 39-45.
  • Beyhan, S., Tischler, A.D., Camilli, A., Yildiz, F.H., 2006. Transcriptome and phenotypic responses of Vibrio cholerae to increased cyclic di-GMP level. Journal of bacteriology 188, 3600-3613.
  • Berry, M.C., McGhee, G.C., Zhao, Y., Sundin, G.W., 2009. Effect of a waaL mutation on lipopolysaccharide composition, oxidative stress survival, and virulence in Erwinia amylovora. FEMS microbiology letters 291, 80-87.
  • Barrow, P.A., Freitas Neto, O.C., 2011. Pullorum disease and fowl typhoid-- new thoughts on old diseases: a review. Avian pathology : journal of the W.V.P.A 40, 1-13.
  • Baraquet, C., Murakami, K., Parsek, M.R., Harwood, C.S., 2012. The FleQ protein from Pseudomonas aeruginosa functions as both a repressor and an activator to control gene expression from the pel operon promoter in response to c-di-GMP. Nucleic acids research 40, 7207-7218.
  • Bandyopadhyay, D., 2014. Farmer to pharmacist: curcumin as an anti-invasive and antimetastatic agent for the treatment of cancer. Frontiers in chemistry 2, 113.
  • Bahk, Y.Y., Kim, S.A., Kim, J.S., Euh, H.J., Bai, G.H., Cho, S.N., Kim, Y.S., 2004. Antigens secreted from Mycobacterium tuberculosis: identification by proteomics approach and test for diagnostic marker. Proteomics 4, 3299-3307.
  • Arora, D.P., Hossain, S., Xu, Y., Boon, E.M., 2015. Nitric Oxide Regulation of Bacterial Biofilms. Biochemistry 54, 3717-3728.
  • Arango Duque, G., Descoteaux, A., 2014. Macrophage cytokines: involvement in immunity and infectious diseases. Frontiers in immunology 5, 491.
  • Alvarez, M.T., Ledesma, N., Tellez, G., Molinari, J.L., Tato, P., 2003. Comparison of the immune responses against Salmonella enterica serovar Gallinarum infection between naked neck chickens and a commercial chicken line. Avian pathology : journal of the W.V.P.A 32, 193-203.
  • Altier, C., Suyemoto, M., Ruiz, A.I., Burnham, K.D., Maurer, R., 2000. Characterization of two novel regulatory genes affecting Salmonella invasion gene expression. Molecular microbiology 35, 635-646.
  • Alm, R.A., Bodero, A.J., Free, P.D., Mattick, J.S., 1996. Identification of a novel gene, pilZ, essential for type 4 fimbrial biogenesis in Pseudomonas aeruginosa. Journal of bacteriology 178, 46-53.
  • Ahn, J., Biswas, D., 2014. Influence of bacteriophage P22 on the inflammatory mediator gene expression in chicken macrophage HD11 cells infected with Salmonella Typhimurium. FEMS microbiology letters 352, 11-17.
  • Ahmad, I., Lamprokostopoulou, A., Le Guyon, S., Streck, E., Barthel, M., Peters, V., Hardt, W.D., Romling, U., 2011. Complex c-di-GMP signaling networks mediate transition between virulence properties and biofilm formation in Salmonella enterica serovar Typhimurium. PloS one 6, e28351.
  • Aerbajinai, W., Lee, K., Chin, K., Rodgers, G.P., 2013. Glia maturation factorgamma negatively modulates TLR4 signaling by facilitating TLR4 endocytic trafficking in macrophages. Journal of immunology (Baltimore, Md. : 1950) 190, 6093-6103.
  • Abel, S., Bucher, T., Nicollier, M., Hug, I., Kaever, V., Abel Zur Wiesch, P., Jenal, U., 2013. Bi-modal distribution of the second messenger c-di-GMP controls cell fate and asymmetry during the caulobacter cell cycle. PLoS genetics 9, e1003744.