박사

Identification and functional characterization of potential thermo-tolerance genes in Solanum tuberosum : 유전자 기능성 스크리닝, 발현억제 및 과발현 방법을 이용한 감자의 (Solanum tuberosum) 고온 스트레스 적응 유전자 기능연구

논문상세정보
' Identification and functional characterization of potential thermo-tolerance genes in Solanum tuberosum : 유전자 기능성 스크리닝, 발현억제 및 과발현 방법을 이용한 감자의 (Solanum tuberosum) 고온 스트레스 적응 유전자 기능연구' 의 주제별 논문영향력
논문영향력 선정 방법
논문영향력 요약
주제
  • cdna library
  • over-expression
  • solanum tuberosum
  • thermo-tolerance
  • virus induced gene silencing
  • yeast functional screening
동일주제 총논문수 논문피인용 총횟수 주제별 논문영향력의 평균
42 0

0.0%

' Identification and functional characterization of potential thermo-tolerance genes in Solanum tuberosum : 유전자 기능성 스크리닝, 발현억제 및 과발현 방법을 이용한 감자의 (Solanum tuberosum) 고온 스트레스 적응 유전자 기능연구' 의 참고문헌

  • Zheng S.Z., Liu Y.L., Li B., Shang Z.L., Zhou R.G., Sun D.Y. (2012) Phosphoinositidespecificphospholipase C9 is involved in the thermo-tolerance of Arabidopsis. Plant J. 69(4): 689-700.
  • Xiang L., Le K., Roy., Bolouri-Moghaddam M.R., Vanhaecke M., Lammens W., RollandF., Van den-Ende W. (2011) Exploring the neutral invertase?oxidative stressdefense connection in Arabidopsis thaliana. J Exp Bot. 62: 3849-62.
  • Xia Z., Su X., Wu J., Wu K., Zhang H. (2012) Molecular cloning and functionalcharacterization of a putative sulfite oxidase (SO) ortholog from Nicotianabenthamiana. Mol Biol Rep. 39(3): 2429-37.
  • Wilson P., B., Estavillo G.M., Field K.J., Pornsiriwong W., Carroll A.J., Howell K.A., etal. (2009). The nucleotidase/phosphatase SAL1 is a negative regulator ofdrought tolerance in Arabidopsis. Plant J. 58: 299?317.
  • Waterhouse A.M., Procter J.B., Martin D.M.A., Clamp M., Barton G.J., (2009). JalviewVersion 2-a multiple sequence alignment editor and analysis workbench. Bioinformatics. 25: 1189-1191.
  • Wang Y., Ying J., Kuzma M., Chalifoux M., Sample A., McArthur C., et al. (2005).
  • Wang H.W., Kwon H.J., Yim W.C., Lim S.D., Moon J.C., Lee B.M., Seo Y.W., Kim W.,Jang C.S. (2010) Expressional diversity of wheat nsLTP genes: evidence ofsubfunctionalization via cis-regulatory divergence. Genetica. 138; 843?852.
  • Wang F., Zang X.S., Kabir M.R, Liu K.L., Liu Z.S., Ni Z.F., Yao Y.Y., Hu Z.R., SunQ.X., Peng H.R. (2014) A wheat lipid transfer protein 3 could enhance thebasal thermo-tolerance and oxidative stress resistance of Arabidopsis. Gene. 550: 18-26.
  • Wang C., Yang C., Gao C, Wang Y. (2009) Cloning and expression analysis of 14 lipidtransfer protein genes from Tamarix hispida responding to different abioticstresses, Tree Physiol. 29:1607?1619.
  • Wan X., Tan J., Lu S., Lin C., Hu Y., Guo Z. (2009) Increased tolerance to oxidativestress in transgenic tobacco expressing a wheat oxalate oxidase gene viainduction of antioxidant enzymes is mediated by H2O2. Physiol Plant. 136(1):30-44.
  • Vignols F., Wigger M., Garcıa-Garrido J.M., Grellet F., Kader J.C., Delseny M. (1997)Rice lipid transfer protein (LTP) genes belong to a complex multigene familyand are differentially regulated, Gene 195:177?186.
  • Vargas W.A., Pontis H.G., Salerno G.L. (2007) Differential expression of alkaline andneutral invertases in response to environmental stresses:characterization of analkaline isoform as a stress-response enzyme in wheat leaves. Planta. 226:1535?1545.
  • Vandenabeele S., Van Der Kelen K., Dat J., Gadjev I., Boonefaes T., Morsa S., RottiersP., Slooten L., Van Montagu M., Zabeau M., Inze D., Van Breusegem F. (2003)A comprehensive analysis of hydrogen peroxide-induced gene expression intobacco. Proc Natl Acad Sci USA. 100(26): 16113-8.
  • Thompson E.W., Lane B.G. (1980). Relation of protein synthesis in imbibing wheatembryos to the cell-free translational capacities of bulk mRNA from dry andimbibing embryos. J. Biol. Chem. 255: 5965?597.
  • Tasma I.M., Brendel V., Whitham S.A., Bhattacharyya M.K. (2008) Expression andevolution of the phosphoinositide-specific phospholipase C gene family inArabidopsis thaliana. Plant Physiol Biochem. 46: 627?637.
  • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S.( 2011). MEGA5:molecular evolutionary genetics analysis using maximum likelihood,evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28:2731-9.
  • Sun W., Bernard C., Van de Cotte B., Van Montagu M., Verbruggen N. (2001) At-HSP17.6A, encoding a small heat-shock protein in Arabidopsis, can enhanceosmotolerance upon overexpression. Plant J. 27: 407-15.
  • Sormani R., Masclaux-Daubresse C., Daniel-Vedele F., Chardon F. (2011)Transcriptional regulatition of Ribosome Components Are Determined byStress According to Cellular Compartments in Arabidopsis thaliana. PLoSONE 6 (12): e28070.doi:10.1371/journal.pone.0028070Soto A., Allona I., Collada C., Guevara M.A., Casado R., Rodriguez?Cerezo E.,Aragoncillo C., Gomez L. (1999) Heterologous expression of a plant smallheat?shock protein enhances Escherichia coli viability under heat and coldstress. Plant Physiol. 120: 521?528.
  • Singh J.P., Lal S.S., Pandey S.K. (2009) Effect of climate change on potato production inIndia. Central Potato Research Institute Shimla, Newsletter 40:17-18.
  • Singh A., Kanwar P., Pandey A., Tyagi A.K., Sopory S.K., Kapoor S., Pandey G.K. (2013) Comprehensive Genomic Analysis and Expression Profiling ofPhospholipase C Gene Family during Abio tic Stresses and Development inRice. PLoS ONE 8 (4): e62494. Doi: 10.1371/journal. pone.0062 494.
  • Serrano R., Gaxiola R. (1994) Microbial models and salt stress tolerance in plants. CritRev Plant Sci. 13:121?138.
  • Senthil-Kumar M., Udayakumar M. (2010) Post transcriptional gene silencing methodsfor functional characterization of abiotic stress responsive genes in plants, inGene Silencing: Theory, Techniques and Applications, Ed A. J. Catalano (NewYork, NY: Nova Science Publishers, Inc.).
  • Senthil-Kumar M., Udayakumar M. (2006). High-throughput virus-induced genesilencingapproach to assess the functional relevance of a moisture stress-135 -induced cDNA homologous to lea4. J. Exp. Bot. 57: 2291?2302.
  • Senthil-Kumar M., Govind G., Kang L., Mysore K.S., Udayakumar M. (2007) Functionalcharacterization of Nicotiana benthamiana homologs of peanut water deficitinducedgenes by virus induced gene silencing. Planta. 225(3): 523-39.
  • Seki M., et al. (2002) Monitoring the expression profiles of 7000 Arabidopsis genesunder drought, cold and high salinity stresses using a full-length cDNA microarray. Plant J. 31: 279?292.
  • Schweizer P., Christoffel A., Dudler R. (1999). Transient expression of members of thegermin like gene family in epidermal cells of wheat confers disease resistance. Plant J. 20: 541?552.
  • Schafleitner R., Gutierrez Rosales R.O., Gaudin A., Alvarado Aliaga C.A., MartinezG.N., Tincopa Marca L.R., Bolivar L.A., Delgado F.M., Simon R., BonierbaleM. (2007) Capturing candidate drought tolerance traits in two native Andeanpotato clones by transcription profiling of field grown plants under waterstress. Plant Physiol. Biochem 45: 673-90.
  • Sarowar S., Kim Y.J., Kim K.D., Hwang B.K., Ok S.H., Shin J.S. (2009) Overexpressionof lipid transfer protein (LTP) genes enhances resistance to plantpathogens and LTP functions in long-distance systemic signaling in tobacco. Plant Cell Rep 28; 419?427.
  • Salamov A.A., Solovyev V.V. (2000) Ab initio gene finding in Drosophila genomicDNA. Genome Res. 10: 516?22.
  • Ryu C.M., Anand A., Lang L., Mysore K.S. (2004) Agrodrench: a novel and effectiveagroinoculation method for virus-induced gene silencing in roots and diversesolanaceous species. Plant J. 40: 322?331.
  • Ramegowda V., Senthil-Kumar M., Udayakumar M., Mysore K.S. (2014) A highthroughputvirus induced gene silencing protocol identifies genes involved inmulti-stress tolerance. BMC Plant Biol. 13: 193.
  • Priyanka B., Sekhar K., Reddy V.D., Rao K.V. (2010) Expression of pigeon pea hybrid?proline?rich protein encoding gene (CcHyPRP) in yeast and Arabidopsisaffords multiple abiotic stress tolerance. Plant Biotech. l8:76?87.
  • Patnaik D, Khurana P. (2001). Germins and germin like proteins: an overview. Ind. J. Exp. Biol. 39: 191?200.
  • Papademetriou M.K. (2008) Proceedings of the workshop to commemorate theinternational year of the potato. Food and agricultural organization of theUnited-Nations, regional office for Asia and the Pacific, Bangkok, Thailand.
  • Ohme-Takagi M., Shinshi H. (1995) Ethylene-inducible DNA binding proteins thatinteract with an ethylene-responsive element. Plant Cell. 7:173?182Oshino T., Abiko M., Saito R., Ichiishi E., Endo M., Kawagishi-Kobayashi M.,Higashitani A. (2007) Premature progression of anther early developmentalprograms accom-panied by comprehensive alterations in transcription duringhigh-temperature injury in barley plants, Mol. Genet. Genomics 278:31?42.
  • Mullarkey M., Jones P. (2000) Isolation and analysis of thermo-tolerant mutants ofwheat. J. Exp. Bot. 51 (342): 139-146.
  • Molecular tailoring of farnesylation for plant drought tolerance and yieldprotection. Plant J. 43: 413?424.
  • McGrath K.C., Dombrecht B., Manners J.M., Schenk P.M., Edgar C.I., Maclean D.J.,Scheible W.R., Udvardi M.K., Kazan K. (2005) Repressor- and activator-typeethylene response factors functioning in jasmonate signaling and diseaseresistance identified via a genome-wide screen of Arabidopsis transcriptionfactor gene expression. Plant Physiol. 139: 949?959.
  • Massa A.N., Childs K.L., Lin H., Bryan G.J., Giuliano G., et al. (2011) TheTranscriptome of the Reference Potato Genome Solanum tuberosum GroupPhureja Clone DM1-3 516R44. PLoS ONE. 6(10): e26801. Doi: 10.1371/journal.pone.0026801.
  • Magiri E.N., Farchi-Pisanty O., Avni A., Breiman A. (2006) The expression of the largerice FK506 binding proteins (FKBPs) demonstrates tissue specificity and heatstress responsiveness. Plant Sci. 170: 695?704.
  • Lou Y., Baldwin I.T. (2006) Silencing of a germin-like gene in Nicotiana attenuataimproves performance of native herbivores. Plant Physiol. 140: 1126?1136.
  • Lopez?Delgado H., Dat J.F., Foyer C.H., Scott I.M.9 (1998). Induction of thermotolerancein potato microplants by acetylsalicylic acid and H2O2. J Exp Bot. 49: 713?720.
  • Liu N., Chen A.P., Zhong N.Q., Wang F., Wang H.Y., Xia G.X. (2007) Functionalscreening of salt stress-related genes from Thellungiella halophila usingfission yeast system. Physiol Plant. 129: 671?678.
  • Levy D., Veilleux R.E. (2007) Adaptation of potato to high temperatures and salinity ? areview. Am. J. Potato Res. 84: 487?506.
  • Kumar K., Yadav S., Purayannur S., Verma P.K. (2013). An alternative approach inGateway cloning when the bacterial antibiotic selection cassettes of the entryclone and destination vector are the same. Mol Biotechnol. 54: 133-40.
  • Koini M.A., Alvey L., Allen T., Tilley C.A., Harberd N.P., Whitelam G.C., Franklin K.A. (2009) High Temperature?Mediated Adaptations in Plant Architecture Requirethe bHLH Transcription Factor PIF4. Curr Biol 19: 408?413.
  • Kappachery S., Yu J.W., Baniekal Hiremath G., Park S.W. (2013) Rapid identification ofpotential drought tolerance genes from Solanum tuberosum by using a yeastfunctional screening method. C. R. Biol. 336(11-12): 530-45.
  • Kader J.C. (1997) Lipid transfer proteins: a puzzling family of plant proteins. Trends inPlant Sci. 2: 66-70.
  • Jim M., Dunwell J., George Gibbings., Tariq Mahmood., Saqlan Naqv S.M. (2008). Germin and Germin like Proteins: Evolution, Structure, and Function. CriticalReviews in Plant Sci. 27: 342?375.
  • Hwang E.W., Kim K.A., Park S.C., Jeong M.J., Byun M.O., Kwon H.B. (2005)Expression profiles of hot pepper (Capsicum annum) genes under cold stressconditions, J. Biosci. 30:657?667.
  • Hu X., Tanaka A., Tanaka R. (2013) Simple extraction methods that prevent theartifactual conversion of chlorophyll to chlorophyllide during pigmentisolation from leaf samples. Plant Methods. 9(1): 19.
  • Hong S.W., Vierling E. (2000) Mutants of Arabidopsis thaliana defective in theacquisition of tolerance to high-temperature stress. Proc Natl Acad Sci USA. 97(8): 4392-7.
  • Hollenbach B., Schreiber L., Hartung W., Dietz K.J. (1997) Cadmium leads to stimulatedexpression of the lipid transfer protein genes in barley: implications for theinvolvement of lipid transfer proteins in wax assembly, Planta 203:9?19.
  • Hemavathi., Upadhyaya C.P., Akula N., Kim H.S., Kim J.H., Ho O.M., Chun S.C., KimD.H,. Park S.W. (2011) Biochemical analysis of enhanced tolerance intransgenic potato plants overexpressing d-galacturonic acid reductase gene inresponse to various abiotic stresses. Mol. Breed. 28: 105-115.
  • Gangadhar B.H., Sajeesh K., Yu J.W., Park S.W. (2014c) Over-expression of a geneencoding hydrogen peroxide-generating germin-like protein induces thermotolerancein potato. Plant Physiol Biochem in-pressGangadhar B.H., Yu J.W., Sajeesh K., Park S.W. (2014a). A systematic exploration ofhigh temperature stress responsive genes in potato using large-scale yeastfunctional screening. Mol. Genet. Genomics. 289: 185?201.
  • Gangadhar B.H., Sajeesh K., Yu J.W. Park S.W. (2014b). Functional characterization ofpotato heat responsive genes in Nicotiana benthamiana under high temperaturestress using virus induced gene silencing. Physiol Plant.-in press.
  • Falcone Ferreyra M.L., Pezza A., Biarc J., Burlingame A.L., Casati P. (2010) Plant L10ribosomal proteins have different roles during development and translationunder ultraviolet-B stress. Plant Physiol. 153: 1878?1894.
  • Eswaran N., Parameswaran S., Sathram B., Anantharaman B., Raja Krishna K.G.,Johnson S.T. (2010) Yeast functional screen to identify genetic determinantscapable of conferring abiotic stress tolerance in Jatropha curcas. BMCBiotechnol. 10: 23.
  • El-Sharkawy I., Mila I., Bouzayen M., Jayasankar S. (2010). Regulation of two germinlike protein genes during plum fruit development. J Exp Bot. 61: 1761-70.
  • Dong Y., Burch-Smith T.M., Liu Y., Mamillapalli P., Dinesh-Kumar S.P. (2007) Aligation-independent cloning tobacco rattle virus vector for high-throughputvirus induced gene silencing identifies roles for NbMADS4-1 and -2 in floraldevelopment. Plant Physiol. 145(4): 1161-70.
  • Cutler S., Ghassemian M., Bonetta D., Cooney S., McCourt P. (1996). A protein farnesyltransferase involved in abscisic acid signal transduction in Arabidopsis. Science. 273: 1239?1241.
  • Conesa A., Gotz S., Garcia-Gomez J.M., Terol J., Talon M., Robles M. (2005) Blast2GO:a universal tool for annotation, visualization and analysis in functionalgenomics research. Bioinformatics. 21: 3674?3676.
  • Choi H.W., Hwang B.K. (2012). The pepper extracellular peroxidase CaPO2 is requiredfor salt, drought and oxidative stress tolerance as well as resistance to fungalpathogens. Planta. 235: 1369?1382.
  • Chen C., Chen G., Hao X., Cao B., Chen Q., Liu S., Lei J. (2011) CaMF2, an antherspecificlipid transfer protein (LTP) gene, affects pollen development inCapsicum annuum L. Plant Sci. 181: 439-448.
  • Cheeseman J.M. (2006) Hydrogen peroxide concentrations in leaves under naturalconditions J Exp Bot. 57: 2435?2444.
  • Charng Y.Y., Liu H.C., Liu N.Y., Chi W.T., Wang C.N., Chang S.H., Wang T.T. (2007) Aheat-inducible transcription factor, HsfA2, is required for extension of acquiredthermo-tolerance in Arabidopsis. Plant Physiol 143(1): 251?262.
  • Carter C., Thornburg R.W. (2000). Tobacco Nectarin I. Purification and characterizationas a germin like, manganese superoxide dismutase implicated in the defense offloral reproductive tissues. J. Biol. Chem. 275: 36726-36733.
  • Cakar Z.P., Alkim C., Turanli B., Tokman N., Akman S., Sarikaya M., Tamerler C.,Benbadis L., Francois J.M. (2009) Isolation of cobalt hyper?resistant mutantsof Saccharomyces cerevisiae by in-vivo evolutionary engineering approach. JBiotech. 143:130?138.
  • Byrd A., St-Arnaud R. (2001) Strategies for rescuing plasmid DNA from yeast twohybridcolonies. Methods Mol Biol. 177: 107-19.
  • Burge C.B., Karlin S. (1998) Finding the genes in genomic DNA. Curr. Opin. Struct. Biol 8: 346?354.
  • Broin M., Cuine S., Peltier G., Rey P. (2000) Involvement of CDSP 32, a drought?induced thioredoxin, in the response to oxidative stress in potato plants. FEBSLetters. 467: 245-248.
  • Bradford M.M. (1976) A rapid and sensitive method for the quantitation of microgramprotein utilizing the principle of protein dye binding. Anal Biochem. 72: 248-254.
  • Bouaziz D., Pirrello J., Ben Amor H., Hammami A., Charfeddine M., Dhieb A.,Bouzayen M., Gargouri-Bouzid R. (2012). Ectopic expression of dehydrationresponsive element binding proteins (StDREB2) confers higher tolerance tosalt stress in potato. Plant Physiol Biochem. 60: 98-108.
  • Bhadula S.K., Elthon T.E., Habben J.E., Helentjaris T.G., Jiao S., Ristic Z. (2001) Heat?stress induced synthesis of chloroplast protein synthesis elongation factor (EF?Tu) in a heat?tolerant maize line. Planta. 212: 359 ?66.
  • Bernier F., Berna A. (2001). Germins and germin like proteins: plant do-all proteins. Butwhat do they do exactly? Plant Physiol Biochem. 39: 545?549.
  • Banerjee J.1., Das N., Dey P., Maiti M.K. (2010) Transgenically expressed rice germinlikeprotein1 in tobacco causes hyper-accumulation of H2O2 and reinforcementof the cell wall components. Biochem Biophys Res Commun 402(4): 637-43554.
  • Banerjee A.K., Prat S., Hannapel D.J. (2006). Efficient production of transgenic potato(S. tuberosum L. andigena) plants via Agrobacterium tumefaciens mediatedtransformation. Plant Sci. 170: 732?738.
  • Altschul S.F., Madden T.L., Scha ffer A.A., Zhang J., Zhang Z., Miller W., Lipman D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein databasesearch programs. Nucleic Acids Res. 25: 3389?3402.
  • Allen G.J., Murata Y., Chu S.P., Nafisi M., Schroeder J.I. (2002). Hypersensitivity ofabscisic acid?induced cytosolic calcium increases in the ArabidopsisFarnesyltransferase mutant era1-2. Plant Cell. 14: 1649?1662
  • Allen G.C., Flores-Vergara M.A., Krasynanski S., Kumar S., Thompson W.F. (2006). Amodified protocol for rapid DNA isolation from plant tissues usingcetyltrimethylammonium bromide. Nat Protoc. 1: 2320-5.
  • Ahn Y.J., Zimmerman J.L. (2006) Introduction of the carrot hsp17.7 into potato(Solanum tuberosum l.) enhances cellular membrane stability and tuberizationin vitro. Plant, Cell and Environ. 29: 95?104.
  • Abe H., Urao T., Ito T., Seki M., Shinozaki K., Yamaguchi-Shinozaki K. (2003)Arabidopsis AtMYC2 (bHLH) and AtMYB2 (MYB) Function as TranscriptionalActivators in Abscisic Acid Signaling. The Plant Cell. 15: 63?78.